Tiratha Raj Singh

Assistant Professor
Department of Biotechnology & Bioinformatics,
JUIT, Waknaghat, H.P., India.

Email: tiratharaj.singh@juit.ac.in; tiratharaj@gmail.com; raj@bioclues.org; raj@bioinfoindia.org
Mobile: 91-9816954695

[Research Interests] [Publications] [Appointments] [Academic Profile] [Lab Members] [Collaborations] [Programs / Web Servers / Databases] [Memberships] [My Networks] [Miscellaneous Links]

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Research Interests: Bioinformatics/Computational Biology

My research interests are concerned with various aspects of Bioinformatics/Computational Biology:

-Functional genomics:
Studying the mitochondrial genomics and evolutionary selection forces shaping genes and genomes and the in-silico
predictions of these forces; Plant genomics, Identification and analyses of SNPs, repair genes, proteins, and pathways.
Genetic association studies. Frameshift mutations and their functional consequences. Computational studies on neurological disorders.

-Systems Biology:
PPIs, and other kind of interactions, Modelling of biological systems, and their structural, functional and evolutionary
implications and applications. Association studies of various repair entities with special relevance to human disease. System level understanding of Alzheimer's disease.

-Molecular Evolution:
Inferring evolutionary relationships and evolutionary dynamics: biological, statistical and computational aspects;
Mitochondrial Gene Rearrangements; Codon Usage Analysis-Implications and Applications.

-Data Mining:
Patterns in Biosequences, Restriction Endonucleases and their structural, functional and evolutionary studies, Mining biological data for meaningful information.

-Structural biology and Proteomics:
Molecular Modeling, CADD and Applications.

-MicroRNAs and MicroArrays

About Some Birds (Passerines) Sylvia atricapilla
Complete Mt Genome
Phylogenetic Tree, Passerines
Beautiful Tunicates

Academic Profile:

Ph.D. in Bioinformatics from the
Department of Bioinformatics, MANIT, Bhopal, India and
Tel-Aviv University, Tel-Aviv, Israel
under the supervision of
Dr. K.R. Pardasani and Dr. Tal Pupko

and Postdoctoral Studies in

The Department of Zoology
Tel Aviv University,Tel Aviv 69978, Israel
At Dr. Dorothée Huchon's Lab

Lab members,JUIT, Waknaghat, Solan, India (2010 - till date)

My Lab members with Ahmed at JUIT Cafe Sept., 2013 during his CV RAMAN Fellowship Tenure

* Priya P. Panigrahi, (PhD student; 2010-15)
* Manika Sehgal, (PhD student; 2011-15)
* Ashwani Kumar, (PhD student; 2013-)
* Ankita, (PhD student; 2013-)
* Ankush Bansal, (PhD student; 2015-)

@ 2013 (MTech students)
* Ashwani Kumar
* Abhay Kumar

@ 2014 (MTech students)
* Rajinder Gupta

@ 2011 (BTech students)
* Ankur Yadav

@ 2012 (BTech students)
* Gurnoor Singh
* Tanya Singhania
* Gautam Mehta
* Ankit Gupta

@ 2013 (BTech students)
* Prashant Mishra
* Mohit Singla
* Vikram Gupta
* Suryakant Singh

@ 2014 (BTech students)
* Jyoti Thakur
* Aakanksha Srivastava
* Harpriya Arora

@ 2015 (BTech students)
* Lokesh Sharma
* Vikran Thakur
* Asuda Sharma
* Aditi Gautam
* Himanshi Arora
* Garima Sanoria
@ 2016 (BTech students)
* Siddharth Tomar
* Satyam Kapoor
* Taruna Thakur
* Vasundhara
* Tuhina Srivastava
* Sheena Singh
* Shubham Thakur
* Aayushi Jain
* Kshushbu Jindal
@ 2016 (MTech students)
* Amrita
* Uttara

Project Fellows, DAVV, Inodre: (2009 - 2010)

* Arun Gupta, (M.Tech)
* Swapnil Patil, (M.Tech)
* Dinesh Chaukiker,(M.Tech)
* Sharat Chandra, (M.Sc.)
* Digvijay Singh Chauhan (M.Sc.)

Lab members (Dr. Dorothée's lab, TAU, Israel): (2006 - 2009)

Lab members (Dr. Tal Pupko's lab, TAU, Israel): (2006 - 2009)

Collaborations: learning a lot from each and everyone

* Dr. K.R. Pardasani
* Dr. Tal Pupko
* Dr. Dorothée Huchon
* Dr. Nimrod Rubinstein
* Dr. Tamar Feldstein
* Dr. Prashanth Suravajhala
* Arun Gupta

Computer Programs / Web Servers / Databases

* WebGenPro
* DoMoS


* International Society for Computational Biology (ISCB) : Since, 2006
* Israeli Society for Bioinformatics and Computational Biology (ISBCB) : Since, 2006
* Indian Science Congress Association (ISCA) : Life Member
* Gwalior Academy of Mathematical Sciences (GAMS): Life Member
* Bioinformatics Society of India (Inbios)
* Genome India International

My Networks:

* Bioclues.org : Vice President
* Bioinformatics.org
* ISCB-RSG-India
* International NanoScience Community
* Mitoaction.org
* MentorNet : Mentor
* BioinfoIndia.org : Founder / Administrator

Miscellaneous Links:

Priyamvada my daughter
Amitva my son
Ragini my wife
Working with Ahmed in my office at JUIT
With Ahmed for a workshop in HPU, Shimla
A light moment with Pandey sir and his wife

Raj at Taj Bahai Garden,Haifa,Israel Ragini's Art Marriage_Raj-Ragini Keep Smiling Our First Album