miRNA Analysis Framework (miRAF) is collection of modules which work all together in terms of pipeline to understand the regulatory interactions in differential condition. Framework helps us to understand the differences occur during change in condition. Designed framework consists following modules:


1) Transcriptome de novo assembly and Analysis

2) miRNA Identification from Transcriptome

3) mRNA Target Prediction of selected miRNAs

4) Gene Ontology inferred network reconstruction

5) Correlation Analysis

6) Co-expression Network reconstruction